Genetic diversity and species prevalence revealed by Mitochondrial COI- DNA sequence of thrips population in cotton

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dc.contributor.authorNagrare, V.S.en_US
dc.contributor.authorGawande, S.P.en_US
dc.contributor.authorNagrale, D.T.en_US
dc.contributor.authorThakare, V.S.en_US
dc.contributor.authorBaghele, D.J.en_US
dc.contributor.authorBiradar, V.K.en_US
dc.contributor.authorNikoshe, A.P.en_US
dc.contributor.authorMeshram, M.en_US
dc.contributor.authorNarkhedkar, N.G.en_US
dc.contributor.authorWaghmare, V.N.en_US
dc.date.accessioned2025-05-12T10:14:25Z
dc.date.available2025-05-12T10:14:25Z
dc.date.issued2024-12
dc.description.abstractAim: To elucidate the population genetic diversity and species prevalence of thrips on cotton. Methodology: Thrips species were identified utilizing both mitochondrial cytochrome oxidase subunit I (COI) sequence analysis and morphology-based keys. Results: Thrips palmi Karny, Thrips hawaiiensis (Morgan), Ayyaria chaetophora Karny, Scirtothrips dorsalis Hood and Rhipiphorothrips cruentatus Hood identified from collected samples. The distribution analysis revealed that T. palmi stands out as the most abundant and prevalent species, constituting a substantial majority (74%) and occupying a pervasive presence across most cotton-growing locations. The phylogenetic analysis, relying on COI sequences, clearly categorized these five species into four distinct major clades. T. hawaiiensis and R. cruentatus were placed within the first clade, while the second clade featured Scirtothrips dorsalis. The third clade comprised the abundant T. palmi, and the fourth clade accommodated A. chaetophora. Interpretation: The study highlighted genetic diversity of five species of thrips, accentuating the emergence of T. palmi as a dominant pest in cotton, an observation not previously reported.en_US
dc.identifier.affiliationsICAR-Central Institute for Cotton Research, Nagpur-440 010, Indiaen_US
dc.identifier.affiliationsICAR-Central Institute for Cotton Research, Nagpur-440 010, Indiaen_US
dc.identifier.affiliationsICAR-Central Institute for Cotton Research, Nagpur-440 010, Indiaen_US
dc.identifier.affiliationsICAR-Central Institute for Cotton Research, Nagpur-440 010, Indiaen_US
dc.identifier.affiliationsCollege of Agriculture, Nagpur - 440 001, Indiaen_US
dc.identifier.affiliationsCollege of Agriculture, Nagpur - 440 001, Indiaen_US
dc.identifier.affiliationsICAR-Central Institute for Cotton Research, Nagpur-440 010, Indiaen_US
dc.identifier.affiliationsICAR-Central Institute for Cotton Research, Nagpur-440 010, Indiaen_US
dc.identifier.affiliationsICAR-Central Institute for Cotton Research, Nagpur-440 010, Indiaen_US
dc.identifier.affiliationsICAR-Central Institute for Cotton Research, Nagpur-440 010, Indiaen_US
dc.identifier.citationNagrare V.S., Gawande S.P., Nagrale D.T., Thakare V.S., Baghele D.J., Biradar V.K., Nikoshe A.P., Meshram M., Narkhedkar N.G., Waghmare V.N. . Genetic diversity and species prevalence revealed by Mitochondrial COI- DNA sequence of thrips population in cotton. Journal of Environmental Biology. 2024 Dec; 45(6): 737-747en_US
dc.identifier.issn0254-8704
dc.identifier.issn2394-0379
dc.identifier.placeIndiaen_US
dc.identifier.urihttps://imsear.searo.who.int/handle/123456789/247533
dc.languageenen_US
dc.publisherTriveni Enterprisesen_US
dc.relation.issuenumber6en_US
dc.relation.volume45en_US
dc.source.urihttps://doi.org/10.22438/jeb/45/6/MRN-5338en_US
dc.subjectCotton thripsen_US
dc.subjectGenetic diversityen_US
dc.subjectMtCOIen_US
dc.subjectPhylogenetic analysisen_US
dc.subjectSpecies prevalenceen_US
dc.titleGenetic diversity and species prevalence revealed by Mitochondrial COI- DNA sequence of thrips population in cottonen_US
dc.typeJournal Articleen_US
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