SNP of AHSA2 gene in three cattle breeds using snapshot technology

Simple item page
dc.contributor.authorCheng, Shu-Zhuen_US
dc.contributor.authorGuang-Xin, E.en_US
dc.contributor.authorLIU, Cheng-Lien_US
dc.contributor.authorBasang, Wang-Duien_US
dc.contributor.authorZhu, Yan-Binen_US
dc.contributor.authorNa, Ri-Suen_US
dc.contributor.authorHan, Yan-Guoen_US
dc.contributor.authorZeng, Yanen_US
dc.contributor.authorWang, Xiaoen_US
dc.contributor.authorNi, Wei-Weien_US
dc.contributor.authorYang, Bai-Gaoen_US
dc.contributor.authorXing-Duan, Haien_US
dc.contributor.authorGuo, Ze-Huien_US
dc.contributor.authorSong, Meihuaen_US
dc.contributor.authorHuang, Yong-Fuen_US
dc.date.accessioned2020-11-18T10:21:06Z
dc.date.available2020-11-18T10:21:06Z
dc.date.issued2020-06
dc.description.abstractDroughtmaster is a tropical breed of beef cattle that can survive in hot climates and easily adapt to torrid environments. These traits are important in livestock breeding. In this study, we genotyped five single-nucleotide polymorphisms (SNPs) of the AHSA2 gene from 190 cattle belonging to three different breeds (Droughtmaster, Angus and Simmental) by using snapshot technology. This work aimed to identify the valuable molecular marker of heat resistance in cattle. Results showed that Droughtmaster exhibited higher expected heterozygosity and polymorphic information content compared with the two other breeds. The AHSA2-1 locus deviated from the Hardy– Weinberg equilibrium in the Droughtmaster breed (P \ 0.05). Two SNPs in Droughtmaster diverged significantly from Angus and Simmental. The SNPs were identified as AHSA2-3 and AHSA2-4, which were closely linked to the three breeds based on pair-wise FST. AHSA2-4 involved a missense mutation. In summary, the GG genotypes in AHSA2-3 and AHSA2-4 may be candidate genotypes associated with heat resistance traits and may serve as valuable genetic markers for breeding of heat-tolerant beef cattle in the future.en_US
dc.identifier.affiliationsCollege of Animal Science and Technology, Chongqing Key Laboratory of Forage and Herbivore, Chongqing Engineering Research Centre for Herbivores Resource Protection and Utilization, Southwest University, Chongqing 400716, People’s Republic of Chinaen_US
dc.identifier.affiliationsCollege of Animal Science and Technology, Chongqing Key Laboratory of Forage and Herbivore, Chongqing Engineering Research Centre for Herbivores Resource Protection and Utilization, Southwest University, Chongqing 400716, People’s Republic of Chinaen_US
dc.identifier.affiliationsCollege of Animal Science and Technology, Chongqing Key Laboratory of Forage and Herbivore, Chongqing Engineering Research Centre for Herbivores Resource Protection and Utilization, Southwest University, Chongqing 400716, People’s Republic of Chinaen_US
dc.identifier.affiliationsState Key Laboratory of Barley and Yak Germplasm Resources and Genetic Improvement (Tibet Academy of Agricultural and Animal Husbandry Science (TAAAS)), Lhasa 850002, Tibet, People’s Republic of Chinaen_US
dc.identifier.affiliationsState Key Laboratory of Barley and Yak Germplasm Resources and Genetic Improvement (Tibet Academy of Agricultural and Animal Husbandry Science (TAAAS)), Lhasa 850002, Tibet, People’s Republic of Chinaen_US
dc.identifier.affiliationsState Key Laboratory of Barley and Yak Germplasm Resources and Genetic Improvement (Tibet Academy of Agricultural and Animal Husbandry Science (TAAAS)), Lhasa 850002, Tibet, People’s Republic of Chinaen_US
dc.identifier.affiliationsCollege of Animal Science and Technology, Chongqing Key Laboratory of Forage and Herbivore, Chongqing Engineering Research Centre for Herbivores Resource Protection and Utilization, Southwest University, Chongqing 400716, People’s Republic of Chinaen_US
dc.identifier.affiliationsCollege of Animal Science and Technology, Chongqing Key Laboratory of Forage and Herbivore, Chongqing Engineering Research Centre for Herbivores Resource Protection and Utilization, Southwest University, Chongqing 400716, People’s Republic of Chinaen_US
dc.identifier.affiliationsCollege of Animal Science and Technology, Chongqing Key Laboratory of Forage and Herbivore, Chongqing Engineering Research Centre for Herbivores Resource Protection and Utilization, Southwest University, Chongqing 400716, People’s Republic of Chinaen_US
dc.identifier.affiliationsCollege of Animal Science and Technology, Chongqing Key Laboratory of Forage and Herbivore, Chongqing Engineering Research Centre for Herbivores Resource Protection and Utilization, Southwest University, Chongqing 400716, People’s Republic of ChinaQixia Manor Veterinary Station, Qixia, Shandong 265300, People’s Republic of Chinaen_US
dc.identifier.citationCheng Shu-Zhu, Guang-Xin E., Liu Cheng-Li, Basang Wang-Dui, Zhu Yan-Bin, Na Ri-Su, Han Yan-Guo, Zeng Yan, Wang Xiao, Ni Wei-Wei, Yang Bai-Gao, Xing-Duan Hai, Guo Ze-Hui, Song Meihua, Huang Yong-Fu. SNP of AHSA2 gene in three cattle breeds using snapshot technology. Journal of Genetics. 2020 Jun; 99: 1-6en_US
dc.identifier.issn0022-1333
dc.identifier.issn0973-7731
dc.identifier.placeIndiaen_US
dc.identifier.urihttps://imsear.searo.who.int/handle/123456789/215507
dc.languageenen_US
dc.publisherIndian Academy of Sciencesen_US
dc.relation.volume99en_US
dc.source.urihttps://doi.org/10.1007/s12041-020-01211-zen_US
dc.subjectAHSA2 geneen_US
dc.subjectheat stressen_US
dc.subjectsnapshot technologyen_US
dc.subjectsingle-nucleotide polymorphismen_US
dc.titleSNP of AHSA2 gene in three cattle breeds using snapshot technologyen_US
dc.typeJournal Articleen_US
Files
Original bundle
Now showing 1 - 1 of 1
Thumbnail Image
Name:
jmsh2019v99pee1.pdf
Size:
447.54 KB
Format:
Adobe Portable Document Format
Download
Collections
Journal of Genetics