The complete chloroplast genome of the threatened Dipentodon sinicus (Dipentodontaceae)

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dc.contributor.authorMing-Tai, Anen_US
dc.contributor.authorXing-Yong, Cuien_US
dc.contributor.authorJia-Xin, Yangen_US
dc.contributor.authorGuo-Xiong, Huen_US
dc.date.accessioned2020-11-18T10:20:45Z
dc.date.available2020-11-18T10:20:45Z
dc.date.issued2019-02
dc.description.abstractDipentodon is a monotypic genus of Dipentodontaceae and the only species, Dipentodon sinicus, is scattered in southwest China as well as adjacent Myanmar, northeast India and northern Vietnam. This species was evaluated as vulnerable in ‘China Species Red List’. Here, we assembled and characterized the complete chloroplast (cp) genome of D. sinicus using Illumina sequencing data for the first time. The complete cp genome was 158,795 bp in length, consisting of a pair of inverted repeats of 26,587 bp, a large single-copy region of 87,233 bp and a small single-copy region of 18,388 bp. The genome encoded 113 unique genes, including 79 protein-coding genes, 30 tRNA genes and four rRNA genes. Phylogenetic analysis based on 16 complete cp genome sequences indicated that D. sinicus is a member of Huerteales, consistent with its position in the latest classification of flowering plants (AGP IV).en_US
dc.identifier.affiliationsCollege of Forestry, Guizhou University, Guiyang 550025, Guizhou, People’s Republic of Chinaen_US
dc.identifier.affiliationsResearch Center for Biodiversity and Nature Conservation, Guizhou University, Guiyang 550025, Guizhou, People’s Republic of Chinaen_US
dc.identifier.affiliationsCollege of Forestry, Guizhou University, Guiyang 550025, Guizhou, People’s Republic of Chinaen_US
dc.identifier.affiliationsCollege of Life Sciences, Guizhou University, Guiyang 550025, Guizhou, People’s Republic of Chinaen_US
dc.identifier.citationMing-Tai An, Xing-Yong Cui, Jia-Xin Yang, Guo-Xiong Hu. The complete chloroplast genome of the threatened Dipentodon sinicus (Dipentodontaceae). Journal of Genetics. 2019 Feb; 98: 1-4en_US
dc.identifier.issn0022-1333
dc.identifier.issn0973-7731
dc.identifier.placeIndiaen_US
dc.identifier.urihttps://imsear.searo.who.int/handle/123456789/215383
dc.languageenen_US
dc.publisherIndian Academy of Sciencesen_US
dc.relation.volume98en_US
dc.source.urihttps://www.ias.ac.in/article/fulltext/jgen/098/0004en_US
dc.subjectchloroplast genomeen_US
dc.subjectDipentodontaceaeen_US
dc.subjectHuertealesen_US
dc.subjectDipentodon sinicus.en_US
dc.titleThe complete chloroplast genome of the threatened Dipentodon sinicus (Dipentodontaceae)en_US
dc.typeJournal Articleen_US
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