Computational modeling and drug designing of Lipoprotein Lipase (LPL) involved in ischemic stroke.

Torabizadeh, Maryam; Munawar, T Mohammad; Prasad, Maruthi; Rayalu, D Jayasimha; Lakshmidevi, K

Computational modeling and drug designing of Lipoprotein Lipase (LPL) involved in ischemic stroke.

Date

2012-10

Authors

Abstract

Homology modeling and flexible docking of Lipoprotein Lipase has been studied in silico approach. Blast result was found to have similarity with Lipoprotein Lipase of 83% identity with 1LPA. Active site of LPL protein was identified by CASTP. Large potential drugs were designed for identifying molecules that can likely bind to protein target of interest. The different drug derivatives designed were used for docking with the generated structure, among the 10 derivatives designed, 3rd derivative showed highest docking result. The drug derivatives were docked to the protein by hydrogen bonding interactions and these interactions play an important role in the binding studies. Our investigations may be helpful for further studies.

Keywords

Lipoprotein Lipase, Modeling, Drug designing, Docking

Citation

Torabizadeh Maryam, Munawar T Mohammad, Prasad Maruthi, Rayalu D Jayasimha, Lakshmidevi K. Computational modeling and drug designing of Lipoprotein Lipase (LPL) involved in ischemic stroke. International Journal of Applied Biology and Pharmaceutical Technology. 2012 Oct-Dec; 3(4): 300-307.